Output details
11 - Computer Science and Informatics
University of Portsmouth
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Article title
A Highly Parameterized and Efficient FPGA-Based Skeleton for Pairwise Biological Sequence Alignment
Type
D - Journal article
Title of journal
IEEE Transactions on Very Large Scale Integration (VLSI) Systems
Article number
-
Volume number
17
Issue number
4
First page of article
561
ISSN of journal
1557-9999
Year of publication
2009
URL
-
Number of additional authors
2
Additional information
<01>This paper reports on the most parameterisable hardware core implementation of biological sequence alignment using dynamic programming. Actual implementation reported two order of magnitude speed-ups compared with pure software implementation, harnessing therefore the suitability of FPGAs in the field of Bioinformatics and Computational Biology.
Interdisciplinary
-
Cross-referral requested
-
Research group
None
Citation count
29
Proposed double-weighted
No
Double-weighted statement
-
Reserve for a double-weighted output
No
Non-English
No
English abstract
-
